Unfortunately your browser does not appear to support WebGL.
Browsers known to work are:
Firefox version 4.0 and above.
Download Firefox
Chrome version 12 and above.
Download Chrome
Microsoft has not announced any plans to support WebGL. If you must use Internet Explorer then
you can use
Chrome Frame which allows a window inside IE to be rendered
with the Chrome rendering engine.
Safari 5.1 also works, but WebGL is not enabled by default.
Instructions to Enable WebGL In Safari
Features of GWATCH
- Unabridged Data Table*
- Manhattan Plots for each Association Test across all SNPs
- SNAPSHOTS of SNP rest results in a chromosome region of SNP chromosome coordinates, MAF**, P-value Plus QAS***
- 2D Heat Plot Snapshot illustrating P-values and QAS of any selected chromosome region
- 3D checkerboard Plot Snapshot illustrating P-values and QAS of selected chromosome region
- LD polarized 3D Checkerboard Snapshot illustrating P-values and QAS of any selected chromosome region
- Dynamic Highway View by Chromosome Browser illustrating P-value and QAS
- TRAX Reports:
- TRAX Summary page–one page graphic summary of QAS, P-values values for a selected SNP
- TRAX analysis report- Full graphs, curves, tables and statistics for all association tests for one selected SNP
- Top association hits
- ranked -log P-value
- ranked QAS**
- ranked Density of -log P-value within a SNP genomic region
Abbreviations:
*TABLE - Unabridged Data Table of P-values vs. QAS for all SNPs genotyped
**MAF - minor allele frequency
***QAS - Quantitative Association Statistic (OR, RH, EZ2 depending on Tests)